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How To Determine Hybridization: A Shortcut
Last updated: December 28th, 2022 |
A Shortcut For Determining The Hybridization Of An Atom In A Molecule
Here’s a shortcut for how to determine the hybridization of an atom in a molecule that will work in at least 95% of the cases you see in Org 1.
For a given atom:
- Count the number of atoms connected to it (atoms – not bonds!)
- Count the number of lone pairs attached to it.
- Add these two numbers together.
- If it’s 4, your atom is sp3.
- If it’s 3, your atom is sp2.
- If it’s 2, your atom is sp.
(If it’s 1, it’s probably hydrogen!)
The main exception is atoms with lone pairs that are adjacent to pi bonds, which we’ll discuss in detail below.
Table of Contents
- Some Simple Worked Examples Of The Hybridization Shortcut
- How To Determine Hybridization Of An Atom: Two Exercises
- Are There Any Exceptions?
- Exception #1: Lone Pairs Adjacent To Pi-bonds
- Lone Pairs In P-Orbitals (Versus Hybrid Orbitals) Have Better Orbital Overlap With Adjacent Pi Systems
- Exception #2. Geometric Constraints
- “Geometry Determines Hybridization, Not The Other Way Around”
- Notes
1. Some Simple Worked Examples Of The Hybridization Shortcut
sp3 hybridization: sum of attached atoms + lone pairs = 4
sp2 hybridization: sum of attached atoms + lone pairs = 3
sp hybridization: sum of attached atoms + lone pairs = 2
Where it can start to get slightly tricky is in dealing with line diagrams containing implicit (“hidden”) hydrogens and lone pairs.
Chemists like time-saving shortcuts just as much as anybody else, and learning to quickly interpret line diagrams is as fundamental to organic chemistry as learning the alphabet is to written English.
Remember:
- Just because lone pairs aren’t drawn in on oxygen, nitrogen, and fluorine doesn’t mean they’re not there.
- Assume a full octet for C, N, O, and F with the following one exception: a positive charge on carbon indicates that there are only six electrons around it. [Nitrogen and oxygen bearing a formal charge of +1 still have full octets].
[Advanced: Note 1 covers how to determine the hybridization of atoms in some weird cases like free radicals, carbenes and nitrenes ]
2. How To Determine Hybridization Of An Atom: Two Exercises
Here’s an exercise. Try picking out the hybridization of the atoms in this highly poisonous molecule made by the frog in funky looking pyjamas, below right.
[Don’t worry if the molecule looks a little crazy: just focus on the individual atoms that the arrows point to (A, B, C, D, E). A and B especially. If you haven’t mastered line diagrams yet (and “hidden” hydrogens) maybe get some more practice and come back to this later.]
Here are some more examples.
More practice quizzes for hybridization can be found here (MOC Membership unlocks them all)
3. Are There Any Exceptions?
Sure. Although as with many things, explaining the shortcut takes about 2 minutes, while explaining the exceptions takes about 10 times longer.
Helpfully, these exceptions fall into two main categories. It should be noted that by the time your course explains why these examples are exceptions, it will likely have moved far beyond hybridization.
Bottom line: these probably won’t be found on your first midterm.
4. Exception #1: Lone Pairs Adjacent To Pi-bonds
The main exception is for atoms bearing lone pairs that are adjacent to pi bonds.
Quick shortcut: Lone pairs adjacent to pi-bonds (and pi-systems) tend to be in unhybridized p orbitals, rather than in hybridized spn orbitals.
This is most common for nitrogen and oxygen.
In the cases below, a nitrogen or oxygen that we might expect to be sp3 hybridized is actually sp2 hybridized (trigonal planar).
Why? The quick answer is that lowering of energy from conjugation of the p-orbital with the adjacent pi-bond more than compensates for the rise in energy due to greater electron-pair repulsion for sp2 versus sp3
[see this post: “Conjugation and Resonance“]
What’s the long answer?
5. Lone Pairs In P-Orbitals (Versus Hybrid Orbitals) Have Better Orbital Overlap With Adjacent Pi Systems
Let’s think back to why atoms hybridize in the first place: minimization of electron-pair repulsion.
For a primary amine like methylamine, adoption of a tetrahedral (sp3) geometry by nitrogen versus a trigonal planar (sp2) geometry is worth about 5 kcal/mol [roughly 20 kJ/mol].
That might not sound like a lot, but for two species in equilibrium, a difference of 5 kcal/mol in energy represents a ratio of about 4400:1] . [How do we know this? See this (advanced) Note 2 on nitrogen inversion]
What if there was some compensating effect whereby a lone pair unhybridized p-orbital was actually more stable than if it was in a hybridized orbital?
This turns out to be the case in many situations where the lone pair is adjacent to a pi bond! The most common and important example is that of amides, which constitute the linkages between amino acids. The nitrogen in amides is planar (sp2), not trigonal pyramidal (sp3), as proven by x-ray crystallography.
The difference in energy varies widely, but a typical value is about 10 kcal/mol favouring the trigonal planar geometry. [We know this because many amides have a measurable barrier to rotation a topic we also talked about in the Conjugation and Resonance post]
Why is trigonal planar geometry favoured here? Better orbital overlap of the p orbital with the pi bond vs. the (hybridized) sp3 orbital.
The drawing below tries to show how a change in hybridization from sp3 to sp2 brings the p-orbital closer to the adjoining p-orbitals of the pi bond, allowing for better orbital overlap. Better orbital overlap allows for stronger pi-bonding between the nitrogen lone pair and the carbonyl p-orbital, which results in an overall lowering of energy.
You can think of this as leading to a stronger “partial” C–N bond. Two important consequences of this interaction are restricted rotation in amides, as well as the fact that acid reacts with amides on the oxygen, not the nitrogen lone pair (!)
The oxygen in esters and enols is also also sp2 hybridized, as is the nitrogen in enamines and countless other examples.
As you will likely see in Org 2, some of the most dramatic cases are those where the “de-hybridized” lone pair participates in an aromatic system. Here, the energetic compensation for a change in hybridization from sp3 to sp2 can be very great indeed – more than 20 kcal/mol in some cases.
For this reason, the most basic site of pyrrole is not the nitrogen lone pair, but on the carbon (C-2) (!).
6. Exception #2. Geometric Constraints
Another example where the actual hybridization differs from what we might expect from the shortcut is in cases with geometric constraints. For instance in the phenyl cation below, the indicated carbon is attached two two atoms and zero lone pairs.
What’s the hybridization?
From our shortcut, we might expect the hybridization to be sp.
In fact, the geometry around the atom is much closer to sp2. That’s because the angle strain adopting the linear (sp) geometry would lead to far too much angle strain to be a stable molecule.
7. “Geometry Determines Hybridization, Not The Other Way Around”
A quote passed on to me from Matt seems appropriate:
“Geometry determines hybridization, not the other way around”
Well, that’s probably more than you wanted to know about how to determine the hybridization of atoms.
Suffice to say, any post from this site that contains shortcut in the title is a sure fire-bet to have over 1000 words and >10 figures.
Thanks to Matt Pierce of Organic Chemistry Solutions for important contributions to this post. Ask Matt about scheduling an online tutoring session here.
Notes
Related Articles
Sometimes you might be asked to determine the hybridization of free radicals and of carbenes (or nitrenes)
Although you’re unlikely to encounter these, let’s still have a look.
- Free radicals exist in a shallow pyramidal geometry, not purely sp2 or sp3.
- However, if they are adjacent to a pi system (e.g. a C-C double or triple bond) then the shallow pyramid will re-hybridize to give it an sp2 geometry, which allows for full resonance delocalization of the free radical.
- Carbenes and nitrenes would give us sp2 geometry by the hybridization shortcut. However their actual structures can vary depending on whether or not the electron pair exists in a single orbital (a singlet carbene) or is divided into two singly-filled orbitals (a triplet carbene). That’s really beyond the scope of introductory organic chemistry.
What about higher block elements like sulfur and phosphorus?
Third row elements like phosphorus and sulfur can exceed an octet of electrons by incorporating d-orbitals in the hybrid. This is more in the realm of inorganic chemistry so I don’t really want to discuss it. Here’s an example for the hybridization of SF4 from elsewhere. (sp3d orbitals).
Note 2: For the 5 kcal/mol figure, see here. [Tetrahedron Lett, 1971, 37, 3437]. (Kurt Mislow, RIP. )
An amine connected to three different substituents (R1 R2 and R3) should be chiral, since it has in total 4 different substituents (including the lone pair). However, all early attempts to prepare enantiomerically pure amines met with failure. It was later found that amines undergo inversion at room temperature, like an umbrella being forced inside-out by a strong wind.
In the transition state for inversion the nitrogen is trigonal planar. One can thus calculate the difference in energy between the sp3 and sp2 geometries by measuring the activation barrier for this process (see ref).
Note 3:A fun counter-example might be Coelenterazine .
One would not expect both nitrogen atoms to be sp2 hybridized, because that would lead to a cyclic, flat, conjugated system with 8 pi electrons : in other words, antiaromatic. I can’t find a crystal structure of the core molecule to confirm (but would welcome any additional information!)
NOTE – (added afterwards) If you draw the resonance form where the nitrogen lone pair forms a pi bond with the carbonyl carbon, then the ring system has 10 electrons and would therefore be “aromatic”.
- Barrier to pyramidal inversion of nitrogen in dibenzylmethylamine
Michael J. S. Dewar and W. Brian Jennings
Journal of the American Chemical Society 1971 93 (2), 401-403
DOI: 10.1021/ja00731a016 -
Pyramidal inversion barriers: the significance of ground state geometry
Joseph Stackhouse, Raymond D.Baechler, Kurt Mislow
Tetrahedron Letters Volume 12, Issue 37, 1971, Pages 3437-3440
DOI: doi.org/10.1016/S0040-4039(01)97199-0
00 General Chemistry Review
01 Bonding, Structure, and Resonance
- How Do We Know Methane (CH4) Is Tetrahedral?
- Hybrid Orbitals and Hybridization
- How To Determine Hybridization: A Shortcut
- Orbital Hybridization And Bond Strengths
- Sigma bonds come in six varieties: Pi bonds come in one
- A Key Skill: How to Calculate Formal Charge
- The Four Intermolecular Forces and How They Affect Boiling Points
- 3 Trends That Affect Boiling Points
- How To Use Electronegativity To Determine Electron Density (and why NOT to trust formal charge)
- Introduction to Resonance
- How To Use Curved Arrows To Interchange Resonance Forms
- Evaluating Resonance Forms (1) - The Rule of Least Charges
- How To Find The Best Resonance Structure By Applying Electronegativity
- Evaluating Resonance Structures With Negative Charges
- Evaluating Resonance Structures With Positive Charge
- Exploring Resonance: Pi-Donation
- Exploring Resonance: Pi-acceptors
- In Summary: Evaluating Resonance Structures
- Drawing Resonance Structures: 3 Common Mistakes To Avoid
- How to apply electronegativity and resonance to understand reactivity
- Bond Hybridization Practice
- Structure and Bonding Practice Quizzes
- Resonance Structures Practice
02 Acid Base Reactions
- Introduction to Acid-Base Reactions
- Acid Base Reactions In Organic Chemistry
- The Stronger The Acid, The Weaker The Conjugate Base
- Walkthrough of Acid-Base Reactions (3) - Acidity Trends
- Five Key Factors That Influence Acidity
- Acid-Base Reactions: Introducing Ka and pKa
- How to Use a pKa Table
- The pKa Table Is Your Friend
- A Handy Rule of Thumb for Acid-Base Reactions
- Acid Base Reactions Are Fast
- pKa Values Span 60 Orders Of Magnitude
- How Protonation and Deprotonation Affect Reactivity
- Acid Base Practice Problems
03 Alkanes and Nomenclature
- Meet the (Most Important) Functional Groups
- Condensed Formulas: Deciphering What the Brackets Mean
- Hidden Hydrogens, Hidden Lone Pairs, Hidden Counterions
- Don't Be Futyl, Learn The Butyls
- Primary, Secondary, Tertiary, Quaternary In Organic Chemistry
- Branching, and Its Affect On Melting and Boiling Points
- The Many, Many Ways of Drawing Butane
- Wedge And Dash Convention For Tetrahedral Carbon
- Common Mistakes in Organic Chemistry: Pentavalent Carbon
- Table of Functional Group Priorities for Nomenclature
- Summary Sheet - Alkane Nomenclature
- Organic Chemistry IUPAC Nomenclature Demystified With A Simple Puzzle Piece Approach
- Boiling Point Quizzes
- Organic Chemistry Nomenclature Quizzes
04 Conformations and Cycloalkanes
- Staggered vs Eclipsed Conformations of Ethane
- Conformational Isomers of Propane
- Newman Projection of Butane (and Gauche Conformation)
- Introduction to Cycloalkanes (1)
- Geometric Isomers In Small Rings: Cis And Trans Cycloalkanes
- Calculation of Ring Strain In Cycloalkanes
- Cycloalkanes - Ring Strain In Cyclopropane And Cyclobutane
- Cyclohexane Conformations
- Cyclohexane Chair Conformation: An Aerial Tour
- How To Draw The Cyclohexane Chair Conformation
- The Cyclohexane Chair Flip
- The Cyclohexane Chair Flip - Energy Diagram
- Substituted Cyclohexanes - Axial vs Equatorial
- Ranking The Bulkiness Of Substituents On Cyclohexanes: "A-Values"
- Cyclohexane Chair Conformation Stability: Which One Is Lower Energy?
- Fused Rings - Cis-Decalin and Trans-Decalin
- Naming Bicyclic Compounds - Fused, Bridged, and Spiro
- Bredt's Rule (And Summary of Cycloalkanes)
- Newman Projection Practice
- Cycloalkanes Practice Problems
05 A Primer On Organic Reactions
- The Most Important Question To Ask When Learning a New Reaction
- Learning New Reactions: How Do The Electrons Move?
- The Third Most Important Question to Ask When Learning A New Reaction
- 7 Factors that stabilize negative charge in organic chemistry
- 7 Factors That Stabilize Positive Charge in Organic Chemistry
- Nucleophiles and Electrophiles
- Curved Arrows (for reactions)
- Curved Arrows (2): Initial Tails and Final Heads
- Nucleophilicity vs. Basicity
- The Three Classes of Nucleophiles
- What Makes A Good Nucleophile?
- What makes a good leaving group?
- 3 Factors That Stabilize Carbocations
- Equilibrium and Energy Relationships
- What's a Transition State?
- Hammond's Postulate
- Learning Organic Chemistry Reactions: A Checklist (PDF)
- Introduction to Free Radical Substitution Reactions
- Introduction to Oxidative Cleavage Reactions
06 Free Radical Reactions
- Bond Dissociation Energies = Homolytic Cleavage
- Free Radical Reactions
- 3 Factors That Stabilize Free Radicals
- What Factors Destabilize Free Radicals?
- Bond Strengths And Radical Stability
- Free Radical Initiation: Why Is "Light" Or "Heat" Required?
- Initiation, Propagation, Termination
- Monochlorination Products Of Propane, Pentane, And Other Alkanes
- Selectivity In Free Radical Reactions
- Selectivity in Free Radical Reactions: Bromination vs. Chlorination
- Halogenation At Tiffany's
- Allylic Bromination
- Bonus Topic: Allylic Rearrangements
- In Summary: Free Radicals
- Synthesis (2) - Reactions of Alkanes
- Free Radicals Practice Quizzes
07 Stereochemistry and Chirality
- Types of Isomers: Constitutional Isomers, Stereoisomers, Enantiomers, and Diastereomers
- How To Draw The Enantiomer Of A Chiral Molecule
- How To Draw A Bond Rotation
- Introduction to Assigning (R) and (S): The Cahn-Ingold-Prelog Rules
- Assigning Cahn-Ingold-Prelog (CIP) Priorities (2) - The Method of Dots
- Enantiomers vs Diastereomers vs The Same? Two Methods For Solving Problems
- Assigning R/S To Newman Projections (And Converting Newman To Line Diagrams)
- How To Determine R and S Configurations On A Fischer Projection
- The Meso Trap
- Optical Rotation, Optical Activity, and Specific Rotation
- Optical Purity and Enantiomeric Excess
- What's a Racemic Mixture?
- Chiral Allenes And Chiral Axes
- Stereochemistry Practice Problems and Quizzes
08 Substitution Reactions
- Introduction to Nucleophilic Substitution Reactions
- Walkthrough of Substitution Reactions (1) - Introduction
- Two Types of Nucleophilic Substitution Reactions
- The SN2 Mechanism
- Why the SN2 Reaction Is Powerful
- The SN1 Mechanism
- The Conjugate Acid Is A Better Leaving Group
- Comparing the SN1 and SN2 Reactions
- Polar Protic? Polar Aprotic? Nonpolar? All About Solvents
- Steric Hindrance is Like a Fat Goalie
- Common Blind Spot: Intramolecular Reactions
- The Conjugate Base is Always a Stronger Nucleophile
- Substitution Practice - SN1
- Substitution Practice - SN2
09 Elimination Reactions
- Elimination Reactions (1): Introduction And The Key Pattern
- Elimination Reactions (2): The Zaitsev Rule
- Elimination Reactions Are Favored By Heat
- Two Elimination Reaction Patterns
- The E1 Reaction
- The E2 Mechanism
- E1 vs E2: Comparing the E1 and E2 Reactions
- Antiperiplanar Relationships: The E2 Reaction and Cyclohexane Rings
- Bulky Bases in Elimination Reactions
- Comparing the E1 vs SN1 Reactions
- Elimination (E1) Reactions With Rearrangements
- E1cB - Elimination (Unimolecular) Conjugate Base
- Elimination (E1) Practice Problems And Solutions
- Elimination (E2) Practice Problems and Solutions
10 Rearrangements
11 SN1/SN2/E1/E2 Decision
- Identifying Where Substitution and Elimination Reactions Happen
- Deciding SN1/SN2/E1/E2 (1) - The Substrate
- Deciding SN1/SN2/E1/E2 (2) - The Nucleophile/Base
- SN1 vs E1 and SN2 vs E2 : The Temperature
- Deciding SN1/SN2/E1/E2 - The Solvent
- Wrapup: The Key Factors For Determining SN1/SN2/E1/E2
- Alkyl Halide Reaction Map And Summary
- SN1 SN2 E1 E2 Practice Problems
12 Alkene Reactions
- E and Z Notation For Alkenes (+ Cis/Trans)
- Alkene Stability
- Alkene Addition Reactions: "Regioselectivity" and "Stereoselectivity" (Syn/Anti)
- Stereoselective and Stereospecific Reactions
- Hydrohalogenation of Alkenes and Markovnikov's Rule
- Hydration of Alkenes With Aqueous Acid
- Rearrangements in Alkene Addition Reactions
- Halogenation of Alkenes and Halohydrin Formation
- Oxymercuration Demercuration of Alkenes
- Hydroboration Oxidation of Alkenes
- m-CPBA (meta-chloroperoxybenzoic acid)
- OsO4 (Osmium Tetroxide) for Dihydroxylation of Alkenes
- Palladium on Carbon (Pd/C) for Catalytic Hydrogenation of Alkenes
- Cyclopropanation of Alkenes
- A Fourth Alkene Addition Pattern - Free Radical Addition
- Alkene Reactions: Ozonolysis
- Summary: Three Key Families Of Alkene Reaction Mechanisms
- Synthesis (4) - Alkene Reaction Map, Including Alkyl Halide Reactions
- Alkene Reactions Practice Problems
13 Alkyne Reactions
- Acetylides from Alkynes, And Substitution Reactions of Acetylides
- Partial Reduction of Alkynes With Lindlar's Catalyst
- Partial Reduction of Alkynes With Na/NH3 To Obtain Trans Alkenes
- Alkyne Hydroboration With "R2BH"
- Hydration and Oxymercuration of Alkynes
- Hydrohalogenation of Alkynes
- Alkyne Halogenation: Bromination, Chlorination, and Iodination of Alkynes
- Alkyne Reactions - The "Concerted" Pathway
- Alkenes To Alkynes Via Halogenation And Elimination Reactions
- Alkynes Are A Blank Canvas
- Synthesis (5) - Reactions of Alkynes
- Alkyne Reactions Practice Problems With Answers
14 Alcohols, Epoxides and Ethers
- Alcohols - Nomenclature and Properties
- Alcohols Can Act As Acids Or Bases (And Why It Matters)
- Alcohols - Acidity and Basicity
- The Williamson Ether Synthesis
- Ethers From Alkenes, Tertiary Alkyl Halides and Alkoxymercuration
- Alcohols To Ethers via Acid Catalysis
- Cleavage Of Ethers With Acid
- Epoxides - The Outlier Of The Ether Family
- Opening of Epoxides With Acid
- Epoxide Ring Opening With Base
- Making Alkyl Halides From Alcohols
- Tosylates And Mesylates
- PBr3 and SOCl2
- Elimination Reactions of Alcohols
- Elimination of Alcohols To Alkenes With POCl3
- Alcohol Oxidation: "Strong" and "Weak" Oxidants
- Demystifying The Mechanisms of Alcohol Oxidations
- Protecting Groups For Alcohols
- Thiols And Thioethers
- Calculating the oxidation state of a carbon
- Oxidation and Reduction in Organic Chemistry
- Oxidation Ladders
- SOCl2 Mechanism For Alcohols To Alkyl Halides: SN2 versus SNi
- Alcohol Reactions Roadmap (PDF)
- Alcohol Reaction Practice Problems
- Epoxide Reaction Quizzes
- Oxidation and Reduction Practice Quizzes
15 Organometallics
- What's An Organometallic?
- Formation of Grignard and Organolithium Reagents
- Organometallics Are Strong Bases
- Reactions of Grignard Reagents
- Protecting Groups In Grignard Reactions
- Synthesis Problems Involving Grignard Reagents
- Grignard Reactions And Synthesis (2)
- Organocuprates (Gilman Reagents): How They're Made
- Gilman Reagents (Organocuprates): What They're Used For
- The Heck, Suzuki, and Olefin Metathesis Reactions (And Why They Don't Belong In Most Introductory Organic Chemistry Courses)
- Reaction Map: Reactions of Organometallics
- Grignard Practice Problems
16 Spectroscopy
- Degrees of Unsaturation (or IHD, Index of Hydrogen Deficiency)
- Conjugation And Color (+ How Bleach Works)
- Introduction To UV-Vis Spectroscopy
- UV-Vis Spectroscopy: Absorbance of Carbonyls
- UV-Vis Spectroscopy: Practice Questions
- Bond Vibrations, Infrared Spectroscopy, and the "Ball and Spring" Model
- Infrared Spectroscopy: A Quick Primer On Interpreting Spectra
- IR Spectroscopy: 4 Practice Problems
- 1H NMR: How Many Signals?
- Homotopic, Enantiotopic, Diastereotopic
- Diastereotopic Protons in 1H NMR Spectroscopy: Examples
- C13 NMR - How Many Signals
- Liquid Gold: Pheromones In Doe Urine
- Natural Product Isolation (1) - Extraction
- Natural Product Isolation (2) - Purification Techniques, An Overview
- Structure Determination Case Study: Deer Tarsal Gland Pheromone
17 Dienes and MO Theory
- What To Expect In Organic Chemistry 2
- Are these molecules conjugated?
- Conjugation And Resonance In Organic Chemistry
- Bonding And Antibonding Pi Orbitals
- Molecular Orbitals of The Allyl Cation, Allyl Radical, and Allyl Anion
- Pi Molecular Orbitals of Butadiene
- Reactions of Dienes: 1,2 and 1,4 Addition
- Thermodynamic and Kinetic Products
- More On 1,2 and 1,4 Additions To Dienes
- s-cis and s-trans
- The Diels-Alder Reaction
- Cyclic Dienes and Dienophiles in the Diels-Alder Reaction
- Stereochemistry of the Diels-Alder Reaction
- Exo vs Endo Products In The Diels Alder: How To Tell Them Apart
- HOMO and LUMO In the Diels Alder Reaction
- Why Are Endo vs Exo Products Favored in the Diels-Alder Reaction?
- Diels-Alder Reaction: Kinetic and Thermodynamic Control
- The Retro Diels-Alder Reaction
- The Intramolecular Diels Alder Reaction
- Regiochemistry In The Diels-Alder Reaction
- The Cope and Claisen Rearrangements
- Electrocyclic Reactions
- Electrocyclic Ring Opening And Closure (2) - Six (or Eight) Pi Electrons
- Diels Alder Practice Problems
- Molecular Orbital Theory Practice
18 Aromaticity
- Introduction To Aromaticity
- Rules For Aromaticity
- Huckel's Rule: What Does 4n+2 Mean?
- Aromatic, Non-Aromatic, or Antiaromatic? Some Practice Problems
- Antiaromatic Compounds and Antiaromaticity
- The Pi Molecular Orbitals of Benzene
- The Pi Molecular Orbitals of Cyclobutadiene
- Frost Circles
- Aromaticity Practice Quizzes
19 Reactions of Aromatic Molecules
- Electrophilic Aromatic Substitution: Introduction
- Activating and Deactivating Groups In Electrophilic Aromatic Substitution
- Electrophilic Aromatic Substitution - The Mechanism
- Ortho-, Para- and Meta- Directors in Electrophilic Aromatic Substitution
- Understanding Ortho, Para, and Meta Directors
- Why are halogens ortho- para- directors?
- Disubstituted Benzenes: The Strongest Electron-Donor "Wins"
- Electrophilic Aromatic Substitutions (1) - Halogenation of Benzene
- Electrophilic Aromatic Substitutions (2) - Nitration and Sulfonation
- EAS Reactions (3) - Friedel-Crafts Acylation and Friedel-Crafts Alkylation
- Intramolecular Friedel-Crafts Reactions
- Nucleophilic Aromatic Substitution (NAS)
- Nucleophilic Aromatic Substitution (2) - The Benzyne Mechanism
- Reactions on the "Benzylic" Carbon: Bromination And Oxidation
- The Wolff-Kishner, Clemmensen, And Other Carbonyl Reductions
- More Reactions on the Aromatic Sidechain: Reduction of Nitro Groups and the Baeyer Villiger
- Aromatic Synthesis (1) - "Order Of Operations"
- Synthesis of Benzene Derivatives (2) - Polarity Reversal
- Aromatic Synthesis (3) - Sulfonyl Blocking Groups
- Birch Reduction
- Synthesis (7): Reaction Map of Benzene and Related Aromatic Compounds
- Aromatic Reactions and Synthesis Practice
- Electrophilic Aromatic Substitution Practice Problems
20 Aldehydes and Ketones
- What's The Alpha Carbon In Carbonyl Compounds?
- Nucleophilic Addition To Carbonyls
- Aldehydes and Ketones: 14 Reactions With The Same Mechanism
- Sodium Borohydride (NaBH4) Reduction of Aldehydes and Ketones
- Grignard Reagents For Addition To Aldehydes and Ketones
- Wittig Reaction
- Hydrates, Hemiacetals, and Acetals
- Imines - Properties, Formation, Reactions, and Mechanisms
- All About Enamines
- Breaking Down Carbonyl Reaction Mechanisms: Reactions of Anionic Nucleophiles (Part 2)
- Aldehydes Ketones Reaction Practice
21 Carboxylic Acid Derivatives
- Nucleophilic Acyl Substitution (With Negatively Charged Nucleophiles)
- Addition-Elimination Mechanisms With Neutral Nucleophiles (Including Acid Catalysis)
- Basic Hydrolysis of Esters - Saponification
- Transesterification
- Proton Transfer
- Fischer Esterification - Carboxylic Acid to Ester Under Acidic Conditions
- Lithium Aluminum Hydride (LiAlH4) For Reduction of Carboxylic Acid Derivatives
- LiAlH[Ot-Bu]3 For The Reduction of Acid Halides To Aldehydes
- Di-isobutyl Aluminum Hydride (DIBAL) For The Partial Reduction of Esters and Nitriles
- Amide Hydrolysis
- Thionyl Chloride (SOCl2)
- Diazomethane (CH2N2)
- Carbonyl Chemistry: Learn Six Mechanisms For the Price Of One
- Making Music With Mechanisms (PADPED)
- Carboxylic Acid Derivatives Practice Questions
22 Enols and Enolates
- Keto-Enol Tautomerism
- Enolates - Formation, Stability, and Simple Reactions
- Kinetic Versus Thermodynamic Enolates
- Aldol Addition and Condensation Reactions
- Reactions of Enols - Acid-Catalyzed Aldol, Halogenation, and Mannich Reactions
- Claisen Condensation and Dieckmann Condensation
- Decarboxylation
- The Malonic Ester and Acetoacetic Ester Synthesis
- The Michael Addition Reaction and Conjugate Addition
- The Robinson Annulation
- Haloform Reaction
- The Hell–Volhard–Zelinsky Reaction
- Enols and Enolates Practice Quizzes
23 Amines
- The Amide Functional Group: Properties, Synthesis, and Nomenclature
- Basicity of Amines And pKaH
- 5 Key Basicity Trends of Amines
- The Mesomeric Effect And Aromatic Amines
- Nucleophilicity of Amines
- Alkylation of Amines (Sucks!)
- Reductive Amination
- The Gabriel Synthesis
- Some Reactions of Azides
- The Hofmann Elimination
- The Hofmann and Curtius Rearrangements
- The Cope Elimination
- Protecting Groups for Amines - Carbamates
- The Strecker Synthesis of Amino Acids
- Introduction to Peptide Synthesis
- Reactions of Diazonium Salts: Sandmeyer and Related Reactions
- Amine Practice Questions
24 Carbohydrates
- D and L Notation For Sugars
- Pyranoses and Furanoses: Ring-Chain Tautomerism In Sugars
- What is Mutarotation?
- Reducing Sugars
- The Big Damn Post Of Carbohydrate-Related Chemistry Definitions
- The Haworth Projection
- Converting a Fischer Projection To A Haworth (And Vice Versa)
- Reactions of Sugars: Glycosylation and Protection
- The Ruff Degradation and Kiliani-Fischer Synthesis
- Isoelectric Points of Amino Acids (and How To Calculate Them)
- Carbohydrates Practice
- Amino Acid Quizzes
25 Fun and Miscellaneous
- A Gallery of Some Interesting Molecules From Nature
- Screw Organic Chemistry, I'm Just Going To Write About Cats
- On Cats, Part 1: Conformations and Configurations
- On Cats, Part 2: Cat Line Diagrams
- On Cats, Part 4: Enantiocats
- On Cats, Part 6: Stereocenters
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The direction of the equal sign may be wrong in the image below this sentence.
Better orbital overlap allows for stronger pi-bonding between the nitrogen lone pair and the carbonyl p-orbital, which results in an overall lowering of energy.
i am in love with this site….. explains so clear and good….. really man i was irritated because i was not able to understand but now i understand it just because of this site….
Sir thankyou so much for your explain , i was able to get a lot of things I couldn’t understand earlier, thanks a lot ,but I have a doubt about the last note ….how did it go from antiaromatic to aromatic in coelentrazine
Thank you for the great post, as usual.
I think there is a typo in the first section of point 5 and its picture; the geometry is trigonal pyramidal instead of tetrahedral.
very helpful thanks a lot SIR
thank youuuuu!!! your discussions really helped my laboratory report in organic chemistry which is due tomorrow. can you have a discussion about the effect of pi systems? i’m looking forward to it!
may i ask for the carbon hybridization of pentane and the effects of the pi system.
Pentane, C5H12 ? Tetrahedral carbons, sp3 hybridized
Well I don’t know what to say is was really helpful to I was able to understand it thank u very much
Hi James! Firstly, thank you so much for your explanation of hybridization! Here I have a question. It says if atom with lone pair next to pi bond, rehydridization will occur so we cannot use the instruction above. So how can we determine whether an atom with lone pair is next to pi bond. Thank you!
Hi, most familiar example would be the lone pairs on the OH group of a carboxylic acid, R-CO2H. The OH oxygen is sp2 hybridized since the lone pair is on an atom adjacent to a pi bond (i.e. the C=O pi bond).
Another example would be an ester, R-CO2CH3 . In this case the lone pair on the oxygen bearing the CH3 (i.e. O-CH3) is sp2 hybridized since it is adjacent to a C=O bond.
Amides, R-C(O)-NH2 have sp2-hybridized nitrogens, since the lone pair on the nitrogen is adjacent to a C=O bond.
The negatively charged carbon in the “allyl anion” is sp2 hybridized.
Lots more examples but these are a few.
This was a great review! I hadn’t done nitrogen hybridization in years and needed a quick refresher. Thanks!!!
Thanks Karla
How to determine the hybridisation state of N atom number 3 in this imidazole ring diagram?: https://upload.wikimedia.org/wikipedia/commons/thumb/b/b8/Imidazole_2D_numbered.svg/110px-Imidazole_2D_numbered.svg.png
Since by geometry, you would expect it to be sp2 hybridised, but there’s also an adjacent pi-bond system (C4 and C5), so you would expect it to be sp hybridised (such that the lone pair occupies p orbital and can undergo resonance with C=C pi orbital).
The art of teaching is so wonderful. Very clear and step-by-step explanations. My heartfelt thanks to you. My congratulations on continuing your service further.
I wonder what will be hybridization on carbocation of ethynylium ion or ethynyl carbocation.
Hi James, thanks for the concise and straight forward explanation of these exceptions. I’m teaching an orgo course this fall and feel better prepared to explain this to students.
Glad to hear it, CK, glad you find it helpful.
Hi! First, I’d like to say that I find your posts extremely helpful, certainly most of the tricks in organic chemistry I’ve learned in here. Reading this post and studying the subject I was thinking about the azobenzene and hydrazobenzene structures, I’d expect them to be sp2 and sp3, respectively, but since they have benzene rings connected to each nitrogen, would these hybridizations be valid?
Hello, thank you so much for the in-depth explanation. I’d just like to ask if exception #1 (Lone Pairs Adjacent To Pi-bonds) applies to N atom of HCN? It’s an example included in the first section as sp, but I would just like to clarify since the resources I’ve found are conflicting. Hehe, again thanks so much, sir! I hope you are well and safe.
The N atom of HCN is sp hybridized. One sp orbital is the C-N sigma bond, and the other has the lone pair on nitrogen. Under no conditions does the lone pair on nitrogen participate in resonance, since that would result in a nitrogen species with six electrons around it (less than an octet) which is very unstable!
What if the number of atom connected to it and the lone pair whe added is more than four, in total what do u call such type of hybridization
I would be wary of applying hybridization concepts to bonds in the 3rd row, such as sulfur, that exceed a full octet.
Time saving concept
Thanks a lot for this info. I searched everywhere but could not get anything on these exceptions of hybridization.
Glad you found it helpful!
very helpful! thanks:))
Glad you found it helpful!
Thanks for a clear explanation of why N and O atoms next to a pi bond or system would rather be sp2 hybridized. Gives me deeper insight as a non – organic chem teacher.
You are welcome Willetta. Thanks for stopping by.
Thanks again! I am finally gaining some facility at this thanks to your deep understanding coupled with your very clear writing.
Glad to hear it John. Thank you.
You, sir, are a tremendous help and credit to the profession of education. Thank you, thank you!
The 1H-NMR of coelenterazine (DOI: 10.1021/ct300356j) shows two signals at 9.13 (s, 1 H), and 6.44 (bs, 1 H), which suggests that the system is conjugated with the carbonyl making it all planar and aromatic when considering the entire bicyclic system. You can observe similar deshielding effects in, say, azulene for the protons on the 7-membered ring.
Now that I look at it again, you’re absolutely right. Thanks Victor.
“Third row elements like phosphorus and sulfur can exceed an octet of electrons by incorporating d-orbitals in the hybrid.”
This is incorrect, and was proven wrong years ago. See http://pubs.acs.org/doi/abs/10.1021/ja00273a006 and citing references therein. It’s more accurate (and more intuitive) to continue to follow the octet rule for sulfur, phosphorus, and other heavy main group elements. SF4, for example, can be represented as four equal-weight resonance structures of the form [SF3]+[F]-, giving an overall bond order of 0.75 for each S-F bond. This way, every atom follows the octet rule in each resonance structure. Of course you could always use molecular orbital theory in conjunction with symmetry-adapted linear combination of atomic orbitals, and then you wouldn’t need to deal with “expanded octets” in hypercoordinate molecules.
Yes and no.
There’s nothing intrinsically wrong in the phrase itself as the “hypervalent” atoms DO use the higher orbitals to some extent. It is more to the point of what orbitals are involved in the overall bonding scheme. And no, nobody, who has at least some understanding of the concept of the hybridization, will insist that by saying that sulfur in SF4 has the sp3d hybridization will strictly mean that we have 100% involvement of 1 s, 3 p, and 1 d orbital in the bonding structure.
It’s the same kind of argument we can bring when discussing, say, cyclopropanone. What is the hybridization of the carbonyl carbon there? Is it sp2? Is it sp2+? Is it sp2-? Is it somewhere in between? What about the hybridization in di-central rhenium complexes with quaternary bond? Or riddle me out, for instance, the exact iodine’s hybridization in every form of periodic acid ;)
When we acknowledge the limitations of the theories we use, they are in a pretty good agreement with each other ;) And while using the MO is the best way to go, it is not what is being taught at the general chemistry or organic chemistry level, nor it is what students are facing on the test.